Uses of Interface
org.pathvisio.libgpml.model.GraphLink.LinkableTo
Package | Description |
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org.pathvisio.libgpml.model |
Classes representing the pathway "model".
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Uses of GraphLink.LinkableTo in org.pathvisio.libgpml.model
Classes in org.pathvisio.libgpml.model that implement GraphLink.LinkableTo Modifier and Type Class Description class
DataNode
This class stores information for a DataNode pathway element.class
DataNode.State
This class stores all information relevant to a State pathway element.class
Group
This class stores all information relevant to a Group pathway element.class
Label
This class stores all information relevant to a Label pathway element.class
LineElement.Anchor
This class stores information for an Anchor pathway element.class
Shape
This class stores all information relevant to a Shape pathway element.class
ShapedElement
This class stores information for shaped pathway elementDataNode
,DataNode.State
,Label
,Shape
, andGroup
.Fields in org.pathvisio.libgpml.model declared as GraphLink.LinkableTo Modifier and Type Field Description private GraphLink.LinkableTo
LineElement.LinePoint. elementRef
Fields in org.pathvisio.libgpml.model with type parameters of type GraphLink.LinkableTo Modifier and Type Field Description private java.util.Map<GraphLink.LinkableTo,java.util.Set<GraphLink.LinkableFrom>>
PathwayModel. elementRefToLinePoints
Methods in org.pathvisio.libgpml.model that return GraphLink.LinkableTo Modifier and Type Method Description GraphLink.LinkableTo
GraphLink.LinkableFrom. getElementRef()
Returns theGraphLink.LinkableTo
pathway element thisGraphLink.LinkableFrom
elementRef refers to.GraphLink.LinkableTo
LineElement.LinePoint. getElementRef()
Returns the pathway element to which this point refers to.GraphLink.LinkableTo
LineElement. getEndElementRef()
Returns the elementRef of the end point.GraphLink.LinkableTo
LineElement. getStartElementRef()
Returns the elementRef of the end point.Methods in org.pathvisio.libgpml.model with parameters of type GraphLink.LinkableTo Modifier and Type Method Description protected void
PathwayModel. addElementRef(GraphLink.LinkableTo elementRef, GraphLink.LinkableFrom linePoint)
Register a link from a elementRef to a linePoint(s).static java.util.Set<GraphLink.LinkableFrom>
GraphLink. getReferences(GraphLink.LinkableTo elementRef, PathwayModel pathwayModel)
Return a list ofGraphLink.LinkableFrom
LineElement.LinePoint
(s) referring to a certainGraphLink.LinkableTo
pathway element or anchor.java.util.Set<GraphLink.LinkableFrom>
PathwayModel. getReferringLinkableFroms(GraphLink.LinkableTo elementRef)
Returns allGraphLink.LinkableFrom
LineElement.LinePoint
that refer to aGraphLink.LinkableTo
pathway element or anchor.void
GraphLink.LinkableFrom. linkTo(GraphLink.LinkableTo elementRef, double relX, double relY)
Links this linkableFrom (e.g.void
LineElement.LinePoint. linkTo(GraphLink.LinkableTo elementRef)
Links this line point to the given object.void
LineElement.LinePoint. linkTo(GraphLink.LinkableTo elementRef, double relX, double relY)
Links this line point to the given object.protected void
PathwayModel. removeElementRef(GraphLink.LinkableTo elementRef, GraphLink.LinkableFrom linePoint)
Removes a linePoint linked to a elementRef.private void
LineElement.LinePoint. setElementRef(GraphLink.LinkableTo v)
Sets the pathway element to which the point refers to.void
LineElement. setEndElementRef(GraphLink.LinkableTo elementRef)
Sets the elementRef for the end point.void
LineElement. setStartElementRef(GraphLink.LinkableTo elementRef)
Sets the elementRef for the start point.protected boolean
GPML2021Writer. writeElementRef(GraphLink.LinkableTo elementRef, org.jdom2.Element e)
Writes elementRef property information.protected boolean
GPML2013aWriter. writePointElementRef(GraphLink.LinkableTo elementRef, org.jdom2.Element pt)
Writes point elementRef property information as GraphRef.