Package org.pathvisio.libgpml.model

Class GPML2021FormatAbstract

java.lang.Object

org.pathvisio.libgpml.model.GPMLFormatAbstract

org.pathvisio.libgpml.model.GPML2021FormatAbstract

Direct Known Subclasses:

GPML2021Reader, GPML2021Writer

public abstract class GPML2021FormatAbstract
extends GPMLFormatAbstract

Read / write GPML files. Base implementation for different GpmlFormat versions. Code that is shared between multiple versions is located here.

Author:

unknown, finterly

Field Summary

Fields

Modifier and Type	Field	Description
static java.lang.String	ANCHORSHAPETYPE_DEFAULT
static java.lang.String	ANNOTATIONTYPE_DEFAULT
static java.lang.String	ARROWHEAD_DEFAULT
static java.lang.String	BACKGROUNDCOLOR_DEFAULT	Default values necessary for reading (when validation off)
static java.lang.String	BORDERCOLOR_DEFAULT
static java.lang.String	BORDERSTYLE_DEFAULT
static java.lang.String	BORDERWIDTH_DEFAULT
static java.lang.String	CONNECTORTYPE_DEFAULT
static java.lang.String	DATANODETYPE_DEFAULT
static java.lang.String	FILLCOLOR_DEFAULT
static java.lang.String	FONTDECORATION_DEFAULT
static java.lang.String	FONTNAME_DEFAULT
static java.lang.String	FONTSIZE_DEFAULT
static java.lang.String	FONTSTRIKETHRU_DEFAULT
static java.lang.String	FONTSTYLE_DEFAULT
static java.lang.String	FONTWEIGHT_DEFAULT
static java.lang.String	GROUPTYPE_DEFAULT
static java.lang.String	HALIGN_DEFAULT
static java.lang.String	LINECOLOR_DEFAULT
static java.lang.String	LINESTYLE_DEFAULT
static java.lang.String	LINEWIDTH_DEFAULT
static java.lang.String	SHAPETYPE_DEFAULT
static java.lang.String	STATETYPE_DEFAULT
static java.lang.String	TEXTCOLOR_DEFAULT
static java.lang.String	VALIGN_DEFAULT

Fields inherited from class org.pathvisio.libgpml.model.GPMLFormatAbstract

BIOPAX_NAMESPACE, OWL_NAMESPACE, RDF_NAMESPACE, RDF_STRING, RDFS_NAMESPACE

Constructor Summary

Constructors

Modifier	Constructor	Description
protected	GPML2021FormatAbstract(java.lang.String xsdFile, org.jdom2.Namespace nsGPML)	Constructor for GPML2021Format Abstract.

Method Summary

Methods inherited from class org.pathvisio.libgpml.model.GPMLFormatAbstract

getGpmlNamespace, getSchemaFile, refreshLineElements, updateGroups, validateDocument

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Details

BACKGROUNDCOLOR_DEFAULT

public static final java.lang.String BACKGROUNDCOLOR_DEFAULT

Default values necessary for reading (when validation off)

See Also:

Constant Field Values

GROUPTYPE_DEFAULT

public static final java.lang.String GROUPTYPE_DEFAULT

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Constant Field Values

DATANODETYPE_DEFAULT

public static final java.lang.String DATANODETYPE_DEFAULT

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Constant Field Values

STATETYPE_DEFAULT

public static final java.lang.String STATETYPE_DEFAULT

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Constant Field Values

ARROWHEAD_DEFAULT

public static final java.lang.String ARROWHEAD_DEFAULT

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Constant Field Values

ANCHORSHAPETYPE_DEFAULT

public static final java.lang.String ANCHORSHAPETYPE_DEFAULT

See Also:

Constant Field Values

ANNOTATIONTYPE_DEFAULT

public static final java.lang.String ANNOTATIONTYPE_DEFAULT

See Also:

Constant Field Values

TEXTCOLOR_DEFAULT

public static final java.lang.String TEXTCOLOR_DEFAULT

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Constant Field Values

FONTNAME_DEFAULT

public static final java.lang.String FONTNAME_DEFAULT

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Constant Field Values

FONTWEIGHT_DEFAULT

public static final java.lang.String FONTWEIGHT_DEFAULT

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Constant Field Values

FONTSTYLE_DEFAULT

public static final java.lang.String FONTSTYLE_DEFAULT

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Constant Field Values

FONTDECORATION_DEFAULT

public static final java.lang.String FONTDECORATION_DEFAULT

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Constant Field Values

FONTSTRIKETHRU_DEFAULT

public static final java.lang.String FONTSTRIKETHRU_DEFAULT

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Constant Field Values

FONTSIZE_DEFAULT

public static final java.lang.String FONTSIZE_DEFAULT

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Constant Field Values

HALIGN_DEFAULT

public static final java.lang.String HALIGN_DEFAULT

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Constant Field Values

VALIGN_DEFAULT

public static final java.lang.String VALIGN_DEFAULT

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Constant Field Values

BORDERCOLOR_DEFAULT

public static final java.lang.String BORDERCOLOR_DEFAULT

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Constant Field Values

BORDERSTYLE_DEFAULT

public static final java.lang.String BORDERSTYLE_DEFAULT

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Constant Field Values

BORDERWIDTH_DEFAULT

public static final java.lang.String BORDERWIDTH_DEFAULT

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Constant Field Values

FILLCOLOR_DEFAULT

public static final java.lang.String FILLCOLOR_DEFAULT

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Constant Field Values

SHAPETYPE_DEFAULT

public static final java.lang.String SHAPETYPE_DEFAULT

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Constant Field Values

LINECOLOR_DEFAULT

public static final java.lang.String LINECOLOR_DEFAULT

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Constant Field Values

LINESTYLE_DEFAULT

public static final java.lang.String LINESTYLE_DEFAULT

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Constant Field Values

LINEWIDTH_DEFAULT

public static final java.lang.String LINEWIDTH_DEFAULT

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Constant Field Values

CONNECTORTYPE_DEFAULT

public static final java.lang.String CONNECTORTYPE_DEFAULT

See Also:

Constant Field Values

Constructor Details

GPML2021FormatAbstract

protected GPML2021FormatAbstract(java.lang.String xsdFile,
org.jdom2.Namespace nsGPML)

Constructor for GPML2021Format Abstract.

Parameters:

xsdFile - the schema file.

nsGPML - the GPML namespace.