Timeline


and .

02/05/10:

23:15 Ticket #1118 (Pathway viewer: Changes to expand/collapse icon on Backpages) created by KristinaHanspers
The expand button in each of the linkout sections in the Backpages works …
18:23 Ticket #326 (It should be possible to set the label background color) closed by martijn
fixed
18:21 Ticket #1034 (For Datanodes - allow users to adjust font.) closed by martijn
fixed
18:20 Ticket #1022 (case error in bp:publicationXref) closed by martijn
fixed
18:20 Changeset [3098] by martijn
Add 'Pathway' as a new DataNodeType?. Fixes #948
18:20 Changeset [3097] by martijn
Fixed setTextLabel(null) problem
18:20 Changeset [3096] by martijn
Better handling of default colors and line styles
18:20 Changeset [3095] by martijn
Make writing GPML2010a the default
18:19 Changeset [3094] by martijn
Write GPML2010a
18:19 Changeset [3093] by martijn
Fix casing for PublicationXref? (#1022)
18:19 Changeset [3092] by martijn
Share stroke and shape (=outline) drawing routines
18:19 Changeset [3091] by martijn
Share TextLabel? drawing between Shape, DataNode? and Label
18:19 Changeset [3090] by martijn
Work on new pathwayElement properties: outline, valign, align, and …
17:39 Ticket #948 (DataNode types in GPML) closed by martijn
fixed
14:41 Changeset [3089] by thomas
updated cytoscape plugin version number
13:49 AlternativeInstallation edited by martijn
(diff)
13:48 AlternativeInstallation edited by martijn
(diff)
13:48 AlternativeInstallation edited by martijn
(diff)
13:48 AlternativeInstallation edited by martijn
(diff)
13:43 Ticket #1117 (nullpointer exception in PropertyDisplayManager init) closed by thomaskelder
fixed
13:39 Changeset [3088] by thomas
fixed #1117
13:39 Changeset [3087] by thomas
fixed #1051
13:35 Ticket #1117 (nullpointer exception in PropertyDisplayManager init) created by thomaskelder
I noticed this while testing the cytoscape plugin (which also uses the …
13:29 Changeset [3086] by martijn
Include version number in windows installer
13:09 Milestone milestone_21 completed
new GPML.xsd version Reads new schema version, but doesn't write by …
13:08 Ticket #1116 (Suitable icons & other improvements to windows install script) created by martijn
The InnoSetup? script, which generates a windows installer, works. But a …
13:03 Changeset [3085] by martijn
Updated PathVisio innoSetup script
12:38 Ticket #1113 (Pathway viewer: Backpage doesn't display properly the second time its ...) closed by thomaskelder
fixed
11:44 Ticket #711 (REMINDER: Compact curation tag display) closed by thomaskelder
fixed
11:25 ReleaseNotes edited by martijn
(diff)
11:21 WikiStart edited by martijn
(diff)
11:14 PathVisioDownload edited by martijn
(diff)
11:14 PathVisioDownload edited by martijn
(diff)
11:09 Changeset [3084] by martijn
Milestone 21 release tag
11:08 Changeset [3083] by martijn
Milestone 21 release branch
11:01 Changeset [3082] by martijn
Updated version number before release

02/04/10:

21:34 Changeset [3081] by martijn
two GPML.xsd tweaks: Remove unused PathwayRef?, use Xref with …
16:04 Changeset [3080] by martijn
Removed left-over trace statements
14:54 Changeset [3079] by martijn
Ignore case when reading BioPAX elements, part of fix for #1022
14:17 Ticket #1060 (PathVisio doesn't display currently selected database) closed by martijn
fixed: I forgot to check in a modification to BridgeDb that was part of the …
14:15 Changeset [3078] by martijn
Updated bridgedb
13:51 Ticket #1051 (backpage panel not refreshed after annotating datanode using search) closed by thomaskelder
fixed
13:51 Changeset [3077] by thomas
fixed #1050
13:27 Ticket #1050 (Backpage shows error with gene without id, but with system code (when ...) closed by thomaskelder
fixed
12:39 Ticket #1091 (Include revision number in History table) closed by thomaskelder
fixed
11:47 Ticket #1115 (Fast lookup which edits were reverted or delete action) created by thomaskelder
To make it possible to fix several bugs related to reverted or deleted …
10:54 Changeset [3076] by martijn
Make "White" the default background for datanodes
10:06 DevMeetings edited by martijn
(diff)
01:35 Ticket #1114 (Pathway Viewer: Right-click temporarily blanks the viewer window) created by KristinaHanspers
This is a weird issue that seems inconsistent, but about half of all …
01:10 Ticket #1113 (Pathway viewer: Backpage doesn't display properly the second time its ...) created by KristinaHanspers
In the new pathway viewer, the Backpages display just fine the first time …
00:27 WikiPathwaysTestProtocol edited by KristinaHanspers
(diff)
00:25 Ticket #1112 (Error when reverting to deleted revision) created by KristinaHanspers
Since I deleted a pathway and then reverted to a previous version, the …
00:23 Ticket #1111 (DiffViewer error when comparing deleted pathway) created by KristinaHanspers
In the History table, it is possible to select a revision of the pathway …
00:07 Ticket #1110 (Feature: Make T-bar the same as mim-inhibition) created by KristinaHanspers
Since there doesn't seem to be a difference in appearance and since it's a …

02/03/10:

22:29 Changeset [3075] by KristinaHanspers
Script to switch between tags on WikiPathways?
20:59 DevMeetings edited by thomaskelder
(diff)
20:47 DevMeetings edited by AlexanderPico
(diff)
20:00 Ticket #1025 (Default value for FontSize is tiny) closed by martijn
fixed: I'm leaving this at 15 and change the conversion factor instead, see #1026
19:59 Ticket #1015 (coordinates not in cm) closed by martijn
fixed
19:50 Ticket #932 (Check that gpml names for datasource are no longer than 20 chars) closed by martijn
fixed: The restriction on datasource length has been removed from GPML
19:49 Ticket #352 (Automatically generate backpage header) closed by martijn
fixed: The Backpage field has been removed from GPML.
15:44 Ticket #1060 (PathVisio doesn't display currently selected database) reopened by martijn
You're right, there is definitely something funky going on. I'll …
12:36 Changeset [3074] by thomas
copy all xml schemas to wikipathways dir
12:20 Changeset [3073] by thomas
fixed resources.jar for wikipathways applet (missing xsd)
11:24 Ticket #1102 (pathway viewer: optimize space usage) closed by thomaskelder
fixed: Now uses whole page width and puts xref info in side panel instead of …
01:06 Ticket #1073 (Create a discussion forum that includes pathway talk pages) closed by AlexanderPico
fixed: RSS parser is now stable (switched to different extension see #1075) and …
01:05 Ticket #1075 (RSS Extension conflicts with webservice) closed by AlexanderPico
fixed: Couldn't salvage RSSReader, so I switch to another extension called RSS. …

02/02/10:

22:54 Changeset [3072] by AlexanderPico
fix #1096
22:54 Ticket #1096 (Open up PathwayTableModel) closed by AlexanderPico
fixed
22:53 Changeset [3071] by AlexanderPico
fix #1108
22:52 Ticket #1108 (Sort Property) closed by AlexanderPico
fixed
22:51 Changeset [3070] by AlexanderPico
fix #1097
22:50 Ticket #1097 (Bug in PathwayElementEvent) closed by AlexanderPico
fixed
22:20 DevMeetings edited by AlexanderPico
(diff)
22:19 DevMeetings edited by AlexanderPico
(diff)
13:25 Ticket #1109 (errors when datasources.txt cannot be downloaded) closed by thomaskelder
fixed
13:00 Changeset [3069] by martijn
Updated GpmlFormat?2010a reading / writing to current version of GPML.xsd …
12:58 Ticket #1109 (errors when datasources.txt cannot be downloaded) created by thomaskelder
When our svn server was down, Alex reported that wikipathways showed error …

02/01/10:

23:05 Ticket #1072 (Update Help Docs) closed by KristinaHanspers
fixed
13:59 Ticket #1108 (Sort Property) created by markwoon
PropertyDisplayManager? allows the sort order of a Property to be defined …
13:55 Ticket #1107 (Avoid NPE in Logger.setDest()) created by markwoon
Logger.setDest() doesn't check for null. Attached patch fixes the …
13:06 Ticket #1078 (IllegalStateException in "find interactions for node" function in ...) closed by thomaskelder
fixed: Ok, I still can't reproduce this error (tested on windows XP and linux), …
13:05 Changeset [3068] by thomas
fixed #1078
11:01 Ticket #1106 (Curation tag edit/delete buttons are not visible in IE6) created by thomaskelder
In Internet Explorer 6, the edit/delete buttons in the top-right corner of …
10:38 Ticket #1099 (Curation tag lists don't display all tagged pathways) closed by thomaskelder
fixed

01/31/10:

20:50 Changeset [3067] by martijn
Add ShapeType?, Background color and Line Style to DataNode?, Label and …
20:50 Changeset [3066] by martijn
Replaced xsd:annotation with normal xml comments, for consistency reasons
20:50 Changeset [3065] by martijn
Updated GPML.xsd added textLabel and font attributes to Shape and …
17:00 Changeset [3064] by martijn
Fix problems with deprecated Point.Head and Pathway.Copyright
17:00 Changeset [3063] by martijn
Added JUnit test
17:00 Changeset [3062] by martijn
Remove deprecated properties in PathwayElement?
17:00 Changeset [3061] by martijn
Remove deprecated attributes from GPML.xsd
16:59 Changeset [3060] by martijn
Test reading / writing different GPML versions
11:41 Ticket #1105 (Avoid unnecessary exception when looking for plugins) created by markwoon
There are 2 things are causing the PluginManager? to throw and log …

01/28/10:

16:01 Ticket #1104 (PathVisio: TIFF export does not work (exact same error as ticket 983)) created by Pieter_Giesbertz
Under windows and using PathVisio 2.0.2 TIFF export for multiple pathways …
15:11 Ticket #1074 (Add ability to have type of anchor you cannot attach to.) closed by martijn
fixed: Excellent. I've committed this.
15:11 Changeset [3059] by martijn
Decorative anchors that you can't attach to (fixes #1074)
10:17 Ticket #656 (SVG Viewer) closed by thomaskelder
fixed: Main implementation work on this has finished. Splitting up remaining …
10:15 Ticket #1103 (pathway viewer & IE 6/7: IE 6/7: linkouts in xref info panel don't scroll ...) created by thomaskelder
Observed in IE 6 and 7: When the xref info panel is smaller than the …
10:09 Ticket #1102 (pathway viewer: optimize space usage) created by thomaskelder
Currently the svg viewer uses the layout of the static png image (the …
10:01 Ticket #1101 (test pathway viewer on Windows Vista / 7 (+FF and IE)) created by thomaskelder
Pankaj reported the pathway viewer didn't work on Vista + Firefox. This …
09:58 Ticket #1100 (pathway viewer: gpml with wrong encoding fails to parse in Chrome) created by thomaskelder
Some GPML files cannot be parsed by the pathway viewer in Chrome. You'll …
00:10 CommunityCurationEvents edited by KristinaHanspers
(diff)
00:06 CommunityCurationEvents edited by KristinaHanspers
(diff)
00:05 CommunityCurationEvents edited by KristinaHanspers
(diff)

01/27/10:

23:59 CommunityCurationEvents edited by KristinaHanspers
(diff)
22:47 Ticket #1099 (Curation tag lists don't display all tagged pathways) created by KristinaHanspers
For the lists of pathways with a specific curation tag, there seems to be …
15:49 Changeset [3058] by martijn
checkstyle headers warning isn't behaving right, disabled
14:44 Ticket #1060 (PathVisio doesn't display currently selected database) closed by martijn
fixed: Thanks, I just committed a fix.
14:44 Changeset [3057] by martijn
Set GdbManager?.genes / .metabolites _before_ firing event. Fixes #1060
14:44 Changeset [3056] by martijn
Upgrade to newer version of checkstyle
13:02 Changeset [3055] by martijn
fix KeggConverter compilation problem
11:53 CommunityCurationEvents edited by thomaskelder
(diff)
11:52 CommunityCurationEvents edited by thomaskelder
(diff)

01/26/10:

20:25 Ticket #1098 (Problems running PathVisio 2 on Windows) created by KristinaHanspers
Just tried running PathVisio 2 on Windows. When I try to run it, I get the …
17:51 Ticket #1052 (Create -v command-line option) closed by martijn
fixed: Committed. Removing the version number redundancy is a nice touch.
17:50 Changeset [3054] by martijn
-v CLI option (fixes 1052, patch by Mark)
17:31 Changeset [3053] by martijn
Disable export action when no pathway is loaded (#1080)
17:30 Ticket #1080 (File -> Export shouldn't be enabled unless pathway is loaded) closed by martijn
fixed: Committed. Actually the only line of this patch that mattered was this …
16:59 Ticket #1079 (File -> Open Recent does not work) closed by martijn
fixed: Patch committed.
16:59 Changeset [3052] by martijn
Fire SAVE event. Fixes #1079, patch by mark woon
15:19 Ticket #1090 (RSS Extension conflicts with webservice) closed by martijn
duplicate: See #1075 for more info. I'm merging the two tickets.
13:34 Ticket #1069 (Introduce PathwayElementEvent) closed by markwoon
fixed: StaticProperty? already has the isCoordinateChange() method added, so …
13:25 Ticket #1097 (Bug in PathwayElementEvent) created by markwoon
PathwayElementEvent?.affectsProperty() doesn't handle dynamic properties …
13:13 Ticket #1096 (Open up PathwayTableModel) created by markwoon
I would like plugins to have more control over how the PathwayTableModel?
12:59 Ticket #1095 ("Show Advanced Properties" preference should take effect immediately) created by markwoon
The "Show Advanced Properties" preference currently does not take effect …
12:27 Ticket #1094 (Include "How to fix this" link in every curation warning) created by martijn
(Suggested by Chris) Some curation warning tag contain links to …

01/25/10:

11:25 Ticket #1093 (Google search doesn't return pathway when searching for "one carbon") created by thomaskelder
Reported by Chris: When searching for words from the title of one carbon …
10:31 Ticket #1092 (Unable to upload image file (png) to WP) closed by thomaskelder
fixed: This was caused by a missing package (probably forgot to install after …

01/22/10:

22:54 Ticket #1092 (Unable to upload image file (png) to WP) created by KristinaHanspers
When I try uploading a png image to either main or test sites, I get the …
14:58 Changeset [3051] by martijn
Updated perl package to new schema
14:58 Changeset [3050] by martijn
Added license headers
14:13 Ticket #1067 (document GPML changes) closed by martijn
fixed: See wiki:GPMLChangeProposal
13:43 Changeset [3049] by martijn
Start of work on GpmlFormat?2010 Enable reading but not yet writing
13:43 Changeset [3048] by martijn
Branched off new version of GPML.xsd
13:29 GPMLChangeProposal edited by martijn
(diff)
13:25 Changeset [3047] by martijn
split GpmlFormatImpl?1 in abstract base (GpmlFormatAbstract?), and concrete …
13:25 Changeset [3046] by martijn
add GpmlFormatVersion? interface
13:25 Changeset [3045] by martijn
Removed some unused methods and redundant parameter

01/21/10:

13:47 Changeset [3044] by thomas
added missing license header
13:26 Changeset [3043] by thomas
- fixed preferencemanager events when setting default if preference file …
12:49 Changeset [3042] by thomas
patch by Mark Woon, to override control of which properties are managed by …
01:41 CommunityCurationEvents edited by KristinaHanspers
(diff)
01:26 CommunityCurationEvents edited by KristinaHanspers
(diff)
01:17 CommunityCurationEvents edited by KristinaHanspers
(diff)
01:02 CommunityCurationEvents edited by KristinaHanspers
(diff)
00:47 CommunityCurationEvents edited by KristinaHanspers
(diff)
00:05 CommunityCurationEvents edited by KristinaHanspers
(diff)
00:04 CommunityCurationEvents edited by KristinaHanspers
(diff)

01/20/10:

23:57 CommunityCurationEvents edited by KristinaHanspers
(diff)
23:45 CommunityCurationEvents edited by KristinaHanspers
(diff)
23:44 CommunityCurationEvents edited by KristinaHanspers
(diff)
23:23 Ticket #1091 (Include revision number in History table) created by KristinaHanspers
It would be convenient if the revision number could be included as a …
22:21 CommunityCurationEvents edited by AlexanderPico
(diff)
22:11 Ticket #1090 (RSS Extension conflicts with webservice) created by AlexanderPico
Something about adding blank lines to the beginning of an xml file
20:46 DevMeetings edited by AlexanderPico
(diff)
20:22 GPMLChangeProposal edited by martijn
(diff)
20:20 GPMLChangeProposal edited by martijn
(diff)
20:18 GPMLChangeProposal edited by martijn
(diff)
20:14 GPMLChangeProposal edited by martijn
(diff)
20:06 GPMLChangeProposal edited by martijn
(diff)
20:04 GPMLChangeProposal edited by martijn
(diff)
20:03 GPMLChangeProposal edited by martijn
(diff)
19:56 DevMeetings edited by martijn
(diff)
18:02 Changeset [3041] by martijn
Make sure GdbEvent? is fired when new gdb is loaded
16:29 PluginDevelopment edited by thomaskelder
(diff)
16:28 PluginDevelopment edited by thomaskelder
added howto for dynamic properties in the property panel (diff)
10:29 Ticket #1089 (New pathways get a "null" curation tag in Google Chrome) closed by thomaskelder
fixed
10:19 Ticket #1089 (New pathways get a "null" curation tag in Google Chrome) created by thomaskelder
When creating a new pathway, a "null" curation tag appears in the curation …
09:29 Ticket #1088 (Webservice: recent changes includes private pathways) closed by thomaskelder
fixed
09:26 Ticket #1088 (Webservice: recent changes includes private pathways) created by thomaskelder
The recent changes method in the WikiPathways? web services includes …
01:47 CommunityCurationEvents edited by KristinaHanspers
(diff)
01:41 CommunityCurationEvents edited by KristinaHanspers
(diff)
01:36 DevMeetings edited by KristinaHanspers
(diff)
01:32 DevMeetings edited by KristinaHanspers
(diff)
01:31 CommunityCurationEvents edited by KristinaHanspers
(diff)
01:02 DevMeetings edited by KristinaHanspers
(diff)

01/19/10:

17:50 Changeset [3040] by thomas
- added possibility for plugins to make a dynamic property to show up in …
17:33 Ticket #1085 (Centralize property display logic) closed by thomaskelder
fixed
17:33 Changeset [3039] by thomas
applied patch by Mark Woon: centralize property display logic (#1085)
17:22 Changeset [3038] by thomas
small tweak to preferences junit test (to make it work when …
17:08 Ticket #1084 (Introduce PreferenceListener) closed by thomaskelder
fixed: Applied patch and added junit test for this event/listener.
17:07 Changeset [3037] by thomas
- applied patch by Mark Woon: introduce preference listener/event (fixes …
12:16 Changeset [3036] by martijn
Fix superpathways compilation, force java-5 compatibility in …
09:11 Ticket #1087 (listPathways cannot be limited to a specific species.) closed by thomaskelder
worksforme: This works fine for me (under linux). Running: […] Are you sure you …

01/18/10:

15:59 Ticket #1087 (listPathways cannot be limited to a specific species.) created by andra
I have created a bash script to get pathways (listPathways.sh) One could …
13:26 Ticket #1086 (Cytoscape plugin: Let user control if annotations should be drawn in front ...) closed by thomaskelder
fixed: Fixed: * Foreground canvas is now default * Change to draw on foreground …
13:21 Changeset [3035] by thomas
Cytoscape plugin: - Replaced use of removed Node and Edge …
13:21 Changeset [3034] by thomas
Cytoscape plugin: - added preference that controls if annotations are …
13:21 Changeset [3033] by thomas
added .gitignore file, to prevent checking in files like resources.jar / …
12:50 Ticket #1086 (Cytoscape plugin: Let user control if annotations should be drawn in front ...) created by thomaskelder
When importing a pathway into Cytoscape, annotations (shapes, lines) may …

01/16/10:

17:40 Ticket #1085 (Centralize property display logic) created by markwoon
Right now, the logic for determining which properties should be displayed …
17:04 Ticket #1084 (Introduce PreferenceListener) created by markwoon
It would be nice to know when a preference is changed so that components …

01/15/10:

23:08 Changeset [3032] by AlexanderPico
#1076 closed
23:07 Ticket #1076 (Allow plugins to pick TypeHandlers for dynamic properties) closed by AlexanderPico
fixed
13:17 DevMeetings edited by martijn
(diff)
12:55 Ticket #1082 (Xref bot not tagging relevant pathways) closed by thomaskelder
fixed: It should be fixed now. The configuration file for the bot didn't include …
01:56 CommunityCurationEvents edited by KristinaHanspers
(diff)
01:52 CommunityCurationEvents edited by KristinaHanspers
(diff)
01:52 CommunityCurationEvents edited by KristinaHanspers
(diff)
01:46 CommunityCurationEvents edited by KristinaHanspers
(diff)
01:36 CommunityCurationEvents created by KristinaHanspers
01:29 TOC edited by KristinaHanspers
(diff)

01/14/10:

23:50 Ticket #1083 (Valid database IDs not found through Search in applet) created by KristinaHanspers
I noticed several gene and metabolite IDs that are no longer found in the …
23:43 Changeset [3031] by AlexanderPico
- new sql folder for useful statements/queries - new sql statement to …
20:52 DevMeetings edited by martijn
(diff)
20:18 Ticket #1082 (Xref bot not tagging relevant pathways) created by KristinaHanspers
The Xref bot (identifying missing xrefs) is correctly identifying …
16:58 Ticket #1081 (Cleanup LineType) created by markwoon
With the new TypeHandlers? the LineType? class can be cleaned up. The …
16:41 Ticket #1080 (File -> Export shouldn't be enabled unless pathway is loaded) created by markwoon
File -> Export shouldn't be enabled unless pathway is loaded. Attaching …
16:40 Ticket #1079 (File -> Open Recent does not work) created by markwoon
"Open Recent" does not work because the SAVE event is never thrown. …
15:22 GPMLChangeProposal edited by martijn
(diff)
15:22 GPMLChangeProposal edited by martijn
(diff)
15:20 GPMLChangeProposal edited by martijn
(diff)
15:16 GPMLChangeProposal edited by martijn
(diff)
15:13 Ticket #1078 (IllegalStateException in "find interactions for node" function in ...) created by thomaskelder
As reported by Michael Creech: The gpml plugin is getting an …
15:12 GPMLChangeProposal edited by martijn
(diff)
15:08 GPMLChangeProposal edited by martijn
(diff)
15:08 GPMLChangeProposal created by martijn
15:08 EverythingGpml edited by martijn
(diff)
15:07 EverythingGpml edited by martijn
(diff)
14:16 ProjectIdeas edited by martijn
(diff)
11:51 Changeset [3030] by martijn
record CPU and memory usage statistics in jUnit test
10:26 Changeset [3029] by martijn
Update Superpathways plugin to change in Cytoscape plugin API

01/13/10:

20:07 Ticket #1077 (Keyboard shortcut Ctrl+L doesn't work on Mac) created by KristinaHanspers
The shortcut to display all unconnected lines (Ctrl+L) doesn't work on …
18:13 Ticket #1076 (Allow plugins to pick TypeHandlers for dynamic properties) created by markwoon
Plugins can add dynamic properties but cannot specify an editor for it …
17:00 Changeset [3028] by martijn
Update superpathways plugin to StaticProperty? API Changes
17:00 Changeset [3027] by martijn
Revision.java should not be checked in.
16:03 Changeset [3026] by martijn
Remove unneeded .orig and .rej files
15:41 Changeset [3025] by thomas
introducing PathwayElementEvent? that allows listeners to monitor specific …
12:52 ProjectIdeas edited by martijn
(diff)

01/12/10:

15:54 Ticket #1075 (RSS Extension conflicts with webservice) created by martijn
I noticed this problem on the automated build system and confirmed it on …
15:10 Ticket #1070 (Remove deprecated methods from PathwayElement.java) closed by thomaskelder
fixed
15:00 Changeset [3024] by thomas
Renamed deprecated GraphIdContainer?.getGmmlData() (for #1070)
15:00 Changeset [3023] by thomas
applied patch by Mark Woon: remove deprecated methods from PathwayElement?

01/11/10:

22:06 Ticket #1042 (make anchor of type ‘None’ invisible when line attached and reappear when ...) closed by martijn
fixed: Committed. Everything works now, at least I couldn't find problems.
22:04 Changeset [3022] by martijn
bug #1042, patch by Margot Sunshine, Small dot is hidden when line is …
16:39 Ticket #1074 (Add ability to have type of anchor you cannot attach to.) created by margot
As part of the MIM requirements I need the user to be able to add an …

01/10/10:

20:59 Changeset [3021] by martijn
Updated contributors list in about Dialog
20:38 Ticket #1073 (Create a discussion forum that includes pathway talk pages) created by AlexanderPico
Ideally, we could have a forum-style discussion page to present and …
20:24 Ticket #1072 (Update Help Docs) created by AlexanderPico
We got some feedback on the Help sections from the perspective of a new …
02:29 Ticket #1068 (PreferenceDlg has duplicate tree node) closed by AlexanderPico
fixed: obvious fix + check on addPanel()
02:26 Changeset [3020] by AlexanderPico
#1068 simple fix + check on addPanel()
02:18 Changeset [3019] by AlexanderPico
#1071 - additional documentation from latest patch submission
01:48 Ticket #1071 (Introduce TypeHandler) closed by AlexanderPico
fixed: remaining compilation error was cleared up
01:46 Changeset [3018] by AlexanderPico
#1071 TypeHandler?

01/09/10:

14:24 Ticket #1071 (Introduce TypeHandler) created by markwoon
I'd like to introduce TypeHandlers?, which define how a PropertyType? should …

01/08/10:

15:55 Ticket #611 (Firewall <-> DataDerby issues) closed by thomaskelder
fixed
15:53 Changeset [3017] by thomas
Patch by Mark Woon: fixes duplicate keybinding to "new" and "exit" actions
15:37 Changeset [3016] by thomas
applying patch by Mark Woon: makes it easier to build wp-client by making …
14:47 Milestone milestone_20 completed
Focus: enable BridgeWebservice? support in the WikiPathways? applet.
13:12 Ticket #1070 (Remove deprecated methods from PathwayElement.java) created by markwoon
I'd like to clean up deprecated methods from PathwayElement?. Most of them …
12:47 Changeset [3015] by thomas
Point release M20.1 for WikiPathways? to include switch to bridgedb …
12:43 Changeset [3014] by thomas
reapply changes for switch to bridgedb webservice
12:35 Changeset [3013] by thomas
reapply changes for switch to bridgedb webservice
12:35 Changeset [3012] by thomas
removed derby-client from wikipathways applet classpath
12:28 ReleaseNotes edited by martijn
(diff)
12:27 WikiStart edited by martijn
(diff)
12:14 PathVisioDownload edited by martijn
(diff)
12:06 Changeset [3011] by martijn
Milestone 20.0 release tag
12:05 Changeset [3010] by martijn
Milestone 20 release branch
11:37 Changeset [3009] by martijn
Updated version numbers for coming milestone
10:09 Ticket #827 (Feature: Change the column header in the list of tagged pathways) closed by thomaskelder
fixed
09:13 Ticket #1069 (Introduce PathwayElementEvent) created by markwoon
PathwayElementListener? currently shares the same event as PathwayListener?. …
08:29 Ticket #1068 (PreferenceDlg has duplicate tree node) created by markwoon
My last patch to PreferenceDlg? made the root node a child node as well. …

01/07/10:

17:13 Changeset [3008] by martijn
Updated lucene-indexer to new GdbProvider? API
14:07 Changeset [3007] by martijn
adjust plugin to changes in cytoscape itself Appearance.getColor() and …
14:07 Changeset [3006] by martijn
Another cytoscape-gpml fix caused by API change
13:21 Changeset [3005] by martijn
Fix compilation error in wikipathways client
11:58 Changeset [3004] by martijn
Speed up freeAttributeSearch with MATCH_ID mode
11:58 Changeset [3003] by martijn
New version of BridgeDb
04:01 PluginDevelopment edited by markwoon
(diff)

01/06/10:

21:26 Changeset [3002] by martijn
Updated Cytoscape-GPML plugin to reflect property API changes
21:19 Ticket #1067 (document GPML changes) created by martijn
reminder: document GPML changes on the wiki
20:07 DevMeetings edited by AlexanderPico
(diff)
19:27 Changeset [3001] by martijn
clean up of Property
19:27 Changeset [3000] by martijn
PreferencePanel? interface, gives plugins freedom to insert any Panel in …
13:16 DevMeetings edited by martijn
(diff)
10:35 Ticket #1030 (Stimulate update of featured pathway tags) closed by thomaskelder
fixed
00:18 DevMeetings edited by AlexanderPico
(diff)
Note: See TracTimeline for information about the timeline view.