Timeline
07/30/10: Yesterday
- 20:02 Ticket #1237 (ClassCastException when editing a pathway for the 2nd time) created by
- How to reproduce: * Start firefox * Go to a pathway page and click the …
- 19:33 Milestone milestone_25 completed
- 19:33 Ticket #1236 ("WikiPathways" not showing up in DataSource drop-down) closed by
- fixed
- 17:35 ReleaseNotes edited by
- (diff)
- 17:34 ReleaseNotes edited by
- (diff)
- 17:28 WikiStart edited by
- (diff)
- 17:27 PathVisioDownload edited by
- (diff)
- 16:57 Changeset [3266] by
- Update version no
- 16:56 Changeset [3265] by
- Point release to fix version no
- 16:55 Changeset [3264] by
- Update version no
- 16:52 Changeset [3263] by
- Milestone 25 tag
- 16:51 Changeset [3262] by
- Milestone 25 release branch
- 12:18 Ticket #1235 (Make datasource dropdown sensitive to datanode type.) closed by
- fixed: Fixed.
- 12:17 Ticket #1220 (No Ensembl links for pig) closed by
- fixed: Should be fixed now.
- 12:07 Changeset [3261] by
- Remove problematic @Overrides
- 12:05 Changeset [3260] by
- Update to bridgedb v1.0.2
- 10:44 Changeset [3259] by
- Remove debugging code
- 10:31 Ticket #1217 (Entering newlines on node text labels) closed by
- fixed: I turned the field for a textlabel from a JTextField into a JTextArea, so …
- 10:29 Changeset [3258] by
- Added license headers
- 10:29 Changeset [3257] by
- Allow multi-line textlabels in DataNodeDialog? (fixes #1217)
- 10:29 Changeset [3256] by
- Add DataNodeType? combo to DataNodeDialog?
- 10:29 Changeset [3255] by
- Fixes #1235: Make DataSourceHandler? sensitive to the DataNodeType? context
07/29/10:
- 15:20 Changeset [3254] by
- changed ID to Identifier in txt exporter (should fix #1197)
- 14:28 Ticket #1197 (Exported gene list doesn not easily load in MS Excel) closed by
- fixed: Changed "ID" to "Identifier". Should be fixed now, but can't test because …
- 14:23 Ticket #1126 (Duplications in Bibliography when two datanodes have the same lit ref) closed by
- fixed
07/28/10:
- 21:24 Ticket #1236 ("WikiPathways" not showing up in DataSource drop-down) created by
- The DataSource? drop-down should list WikiPathways? itself as a possible …
- 21:23 Ticket #1235 (Make datasource dropdown sensitive to datanode type.) created by
- For example, when datanode type is Metabolite, HMDB ChEBI etc. should show …
- 21:23 Ticket #1195 (Linking to entrez gene) closed by
- wontfix: This is a known problem with the data sources that maintain the various …
- 21:14 Ticket #1202 (Not possible to change the size of a receptor or ligand when drawing in ...) closed by
- duplicate: Duplicate of #1194
- 21:06 Ticket #1196 (Periodical save should not start after user already started a regular save) closed by
- duplicate
- 20:47 Ticket #1206 (SecurityException when saving pathway) closed by
- worksforme
- 19:52 DevMeetings edited by
- (diff)
- 19:32 DevMeetings edited by
- (diff)
07/27/10:
- 14:40 Changeset [3253] by
- use the terms "MIM shapes" and "MIM interactions"
- 14:40 Changeset [3252] by
- update some icons (change background to transparent)
- 14:40 Changeset [3251] by
- programmatic hook for user to add new shapes to the side-bar tab
- 14:40 Changeset [3250] by
- 1. change the title of the side-bar tab from "Items" to "Objects" 2. …
- 14:40 Changeset [3249] by
- add a new tab in the sidebar with all the shapes
- 14:40 Changeset [3248] by
- 1. remove "arc", "brace", "tbar", "receptor/ligand", add "arrow" 2. …
- 14:40 Changeset [3247] by
- pressing Shift can reserve the width-height ratio during dragging the …
- 14:40 Changeset [3246] by
- TestDropDown? plugin
- 14:40 Changeset [3245] by
- remove tag '//lb', fix the bug of 'buttons stay selected'
- 14:40 Changeset [3244] by
- Merged trunk r3191:3195 into gsoc-liubing
- 14:40 Changeset [3243] by
- ticket #1181: Office-like toolbar
- 14:40 Changeset [3242] by
- 14:40 Changeset [3241] by
- 30 icons are added
- 14:40 Changeset [3240] by
- test
07/26/10:
- 23:09 Ticket #1234 (single quotes in discussion thread titles causes parsing error in "Latest ...) closed by
- fixed: fixed by replacing single quotes with pairs of single quotes in query …
- 14:54 Changeset [3239] by
07/25/10:
- 20:20 Ticket #1234 (single quotes in discussion thread titles causes parsing error in "Latest ...) created by
- The main page of wikipathways is vulnerable to discussion thread titles …
07/24/10:
- 00:00 Changeset [3238] by
- Parser for PV html exports to MediaWiki? ImageMap? format, with links to …
07/23/10:
- 11:28 Ticket #1232 (Is it possbile to "autocreate" a blank pahway from expression data) closed by
- duplicate: Duplicate of #1233
- 11:27 Ticket #1233 (Is it possbile to "autocreate" a blank pahway from expression data) closed by
- wontfix: P.S. I'm closing this ticket, we'll handle the rest by email.
07/22/10:
- 19:12 Changeset [3237] by
- - Changed maplinks from labels to datanodes - Fixed multiple labels for …
- 18:53 Ticket #1228 (SegmentedConnectorShape) closed by
- fixed: I've applied it to the trunk, it will be included in the next release. …
- 18:52 Changeset [3236] by
- - free segment connector (modified patch by leon)
- 15:45 Ticket #1233 (Is it possbile to "autocreate" a blank pahway from expression data) created by
- Dear all! Genmapp has the nice property to be able to autocreate a …
- 15:45 Ticket #1232 (Is it possbile to "autocreate" a blank pahway from expression data) created by
- Dear all! Genmapp has the nice propoerty to be able to autocreate a …
- 15:41 Ticket #1231 (Pathway files (gpml and mapps) behave somehow differently) created by
- Dear all! I encounter a problem that make imported mapp files form …
07/21/10:
- 16:55 Changeset [3235] by
- Extra FileUtils? method for replacing an extension
07/20/10:
- 19:56 Changeset [3234] by
- 1. update "positioning pathway during scroll-wheel zooming" 2. panning …
07/19/10:
- 12:28 Ticket #1225 (NullPointerException when opening GPML files with custom ConnectorType) closed by
- fixed
- 12:28 Changeset [3233] by
- fixed #1225
- 08:57 Ticket #1230 (Allow to open pathway by identifier in the Cytoscape plugins) created by
- In the GPML and superpathways plugin, you can search for pathways by name. …
- 08:56 Ticket #1229 (Show pathway identifier somewhere on page) created by
- It would be handy to show the pathway identifier somewhere on the pathway …
07/16/10:
- 20:33 Ticket #1228 (SegmentedConnectorShape) created by
- Hi, I've implemented a new connectorShape that can have multiple …
07/15/10:
- 16:12 Changeset [3232] by
- Keep relative position while zooming
07/13/10:
- 15:42 Ticket #1227 (Entrez LinkOut support for wikipathways) created by
- It would be nice to add wikipathways to the LinkOut? section of Entrez …
07/12/10:
- 23:01 Ticket #1226 (Pathway panning with middle mouse button) created by
- Adding panning with the middle mouse button as a feature was suggested by …
- 22:58 Ticket #1212 (Allow user to upload their own images to denote species) closed by
- wontfix: I am going to close this ticket since it will require non-trivial changes …
- 17:31 Ticket #1225 (NullPointerException when opening GPML files with custom ConnectorType) created by
- I tried changing '<Graphics ConnectorType?="Elbow" ...' to '<Graphics …
07/10/10:
- 19:59 Changeset [3231] by
- fix the negative zooming bug (ticket #1224) in version 3230
- 19:51 Changeset [3230] by
- use the terms "MIM shapes" and "MIM interactions"
- 19:49 Changeset [3229] by
- update some icons (change background to transparent)
07/09/10:
- 14:19 Changeset [3228] by
- fixed compiler error in superpathways plugin
- 13:31 Changeset [3227] by
- fixed #1223
- 13:30 Changeset [3226] by
- fixed #1223
- 12:29 Ticket #1223 (superpathways pluging for cytoscape) closed by
- fixed: Fixed jar submitted to Cytoscape plugin repository (v1.2).
- 01:37 Ticket #1224 (Negative zoom allowed => pathway is displayed inverted) created by
- Using the scroll-zoom feature (by Bing for GSoC) or by typing in a …
07/08/10:
- 03:34 Changeset [3225] by
- updated bridgedb jars, adding Gene Wiki support
07/07/10:
- 19:59 DevMeetings edited by
- (diff)
- 19:39 DevMeetings edited by
- (diff)
- 19:37 DevMeetings edited by
- (diff)
- 19:32 DevMeetings edited by
- (diff)
07/06/10:
- 13:37 Ticket #1223 (superpathways pluging for cytoscape) created by
- Hello, I would like find related pathways from wikipathways. How can I …
07/05/10:
- 12:13 Ticket #1222 (Unused PublicationXref) created by
- In GPML.xsd, there is an element "PublicationXref?" in the xsd group …
07/03/10:
- 11:12 Changeset [3224] by
- ticket #1185 - zoom with scrollwheel
- 11:11 Changeset [3223] by
- programmatic hook for user to add new shapes to the side-bar tab
- 11:10 Changeset [3222] by
- 1. change the title of the side-bar tab from "Items" to "Objects" 2. …
07/02/10:
- 09:45 Ticket #1221 (Start using datanodes instead of labels to point to another pathway) created by
- It would be beneficial for several use cases to start using datanodes to …
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