|
#843
|
PathVisio color set selection is too complicated
|
major
|
Pathvisio
|
martijn
|
new
|
02/23/09
|
|
#902
|
Safari .svg error
|
major
|
WikiPathways website
|
thomaskelder
|
new
|
05/20/09
|
|
#904
|
Safari internetsite upload
|
major
|
WikiPathways website
|
AlexanderPico
|
new
|
05/20/09
|
|
#964
|
GPML Plugin and Unique IDs
|
major
|
Cytoscape plugin
|
AlexanderPico
|
new
|
08/05/09
|
|
#1098
|
Problems running PathVisio 2 on Windows
|
major
|
Pathvisio
|
martijn
|
new
|
01/26/10
|
|
#1130
|
invalid svg on wikipathways
|
major
|
WikiPathways website
|
AlexanderPico
|
new
|
03/02/10
|
|
#1144
|
I cannot change my password
|
major
|
uncategorized
|
martijn
|
new
|
03/15/10
|
|
#1145
|
Tickness arowhead
|
major
|
Pathvisio
|
akshay.bhardwaj
|
new
|
03/15/10
|
|
#1160
|
Bugs
|
major
|
Pathvisio
|
martijn
|
new
|
04/15/10
|
|
#1161
|
Unable to save changes or export pathway after removing anchors
|
major
|
Wikipathways applet
|
Martijn
|
new
|
04/16/10
|
|
#1164
|
findPathwaysByXref query with very long result ends in php allowed memory exhausted error
|
major
|
WikiPathways web service
|
thomaskelder
|
new
|
04/22/10
|
|
#1176
|
Unable to have groups in a group in wikipathways
|
major
|
uncategorized
|
martijn
|
new
|
05/12/10
|
|
#1177
|
Loading pathway on WikiPathways is unworkably slow
|
major
|
uncategorized
|
martijn
|
new
|
05/13/10
|
|
#1190
|
Mouse no longer active after changing attributes for multiple elements
|
major
|
uncategorized
|
martijn
|
new
|
05/15/10
|
|
#1194
|
Arrow heads don't change with linethickness, and receptors don't change size
|
major
|
uncategorized
|
martijn
|
new
|
05/15/10
|
|
#1203
|
PathVisio File Downloader does not work
|
major
|
uncategorized
|
martijn
|
new
|
06/03/10
|
|
#1205
|
cannot edit micronutrient portal
|
major
|
WikiPathways website
|
AlexanderPico
|
assigned
|
06/07/10
|
|
#1231
|
Pathway files (gpml and mapps) behave somehow differently
|
major
|
uncategorized
|
martijn
|
new
|
07/22/10
|
|
#142
|
Can give two DataNodes the same GraphId
|
minor
|
Wikipathways applet
|
martijn
|
assigned
|
07/18/07
|
|
#200
|
dgpml can't handle changes to mappinfo object
|
minor
|
Diffviewer applet
|
martijn
|
assigned
|
08/22/07
|
|
#224
|
Resizing applet results in blank pathway until resized to larger size
|
minor
|
Wikipathways applet
|
anonymous
|
new
|
09/05/07
|
|
#242
|
Mappinfo sometimes clipped off when exporting png
|
minor
|
Wikipathways applet
|
anonymous
|
new
|
09/12/07
|
|
#245
|
Allow thumbnail view of any pathway list
|
minor
|
Wikipathways applet
|
AlexanderPico
|
assigned
|
09/19/07
|
|
#266
|
PathVisio does not ask user to save pathway when shutting down windows
|
minor
|
Pathvisio
|
thomaskelder
|
assigned
|
11/02/07
|
|
#382
|
Pathway diff does not work for unevenly sized pathways
|
minor
|
Diffviewer applet
|
martijn
|
assigned
|
03/07/08
|
|
#387
|
Add 'not working?' link to visual diff tool
|
minor
|
Wikipathways applet
|
martijn
|
assigned
|
03/09/08
|
|
#420
|
The synonym database server on wikipathways.org should have a limitation on number of requests
|
minor
|
WikiPathways website
|
anonymous
|
new
|
03/18/08
|
|
#433
|
applet hangs when user doesn't accept certificate
|
minor
|
Wikipathways applet
|
thomaskelder
|
new
|
03/28/08
|
|
#449
|
Pasted objects should be ordered in front
|
minor
|
Wikipathways applet
|
martijn
|
assigned
|
04/14/08
|
|
#495
|
Selecting an item in the right-click menu sometimes causes selected objects to move.
|
minor
|
Wikipathways applet
|
anonymous
|
new
|
05/06/08
|
|
#509
|
Allowed to edit pathway after automatically logged out, but save fails
|
minor
|
Wikipathways applet
|
anonymous
|
new
|
05/14/08
|
|
#514
|
diffviewer: unchanged groups make changed elements below them unclickable.
|
minor
|
Diffviewer applet
|
martijn
|
assigned
|
05/14/08
|
|
#515
|
Establishing database connection should have time limit or cancel button
|
minor
|
WikiPathways website
|
anonymous
|
new
|
05/15/08
|
|
#544
|
what should backpage say when a label is selected?
|
minor
|
Wikipathways applet
|
anonymous
|
new
|
05/29/08
|
|
#581
|
Error creating thumbnail
|
minor
|
WikiPathways website
|
thomaskelder
|
new
|
06/22/08
|
|
#582
|
Font list should only show fonts that are present on server
|
minor
|
Wikipathways applet
|
anonymous
|
new
|
06/23/08
|
|
#587
|
Google Custom Search Fails on Certain Pairs of Genes
|
minor
|
WikiPathways website
|
anonymous
|
new
|
07/09/08
|
|
#614
|
Include links to Hapmap SNP information
|
minor
|
Wikipathways applet
|
anonymous
|
new
|
09/08/08
|
|
#628
|
improve DataNode annotation dialog
|
minor
|
Wikipathways applet
|
anonymous
|
new
|
09/11/08
|
|
#636
|
edit color set, recent colors
|
minor
|
Pathvisio
|
martijn
|
assigned
|
09/15/08
|
|
#651
|
Connector position not updated when resizing an object
|
minor
|
Wikipathways applet
|
anonymous
|
new
|
10/07/08
|
|
#652
|
Connector position not updated when moving grouped elements
|
minor
|
Wikipathways applet
|
anonymous
|
new
|
10/07/08
|
|
#660
|
Download MAPP - jnlp - Faq item
|
minor
|
Wikipathways applet
|
anonymous
|
new
|
10/09/08
|
|
#672
|
Undo option
|
minor
|
Wikipathways applet
|
anonymous
|
new
|
11/01/08
|
|
#673
|
No ability to rotate or re-size grouped objects
|
minor
|
Wikipathways applet
|
anonymous
|
new
|
11/01/08
|
|
#676
|
Multiple select issues
|
minor
|
Wikipathways applet
|
anonymous
|
new
|
11/01/08
|
|
#678
|
Squares and Ovals should be symmetrical if selecting shift
|
minor
|
Wikipathways applet
|
anonymous
|
new
|
11/01/08
|
|
#679
|
On nbx7, launching help results in empty browser window.
|
minor
|
Wikipathways applet
|
martijn
|
assigned
|
11/09/08
|
|
#680
|
Support for CSV
|
minor
|
Pathvisio
|
martijn
|
assigned
|
11/09/08
|
|
#739
|
Bot to scan for duplicate names
|
minor
|
WikiPathways website
|
thomaskelder
|
new
|
12/10/08
|
|
#778
|
z-order is ignored in cytoscape plugin
|
minor
|
Cytoscape plugin
|
thomaskelder
|
new
|
01/22/09
|
|
#796
|
Changing the font of the Data node label results in blurry labels
|
minor
|
Pathvisio
|
martijn
|
new
|
02/05/09
|
|
#837
|
Backpage disappears after modifying xref
|
minor
|
Wikipathways applet
|
thomaskelder
|
new
|
02/19/09
|
|
#852
|
Documentation for Cytoscape plugin
|
minor
|
Cytoscape plugin
|
thomaskelder
|
new
|
03/13/09
|
|
#854
|
Autosave timer should be stopped when entering manual save description
|
minor
|
Wikipathways applet
|
thomaskelder
|
new
|
03/16/09
|
|
#858
|
After selecting zoom-to-fit, show actual percentage
|
minor
|
Wikipathways applet
|
martijn
|
new
|
03/25/09
|
|
#859
|
Undoing to start does not update status flag
|
minor
|
Wikipathways applet
|
thomaskelder
|
new
|
03/25/09
|
|
#866
|
Lit refs mark on pathway info area get's moved when pathway is zoomed
|
minor
|
Wikipathways applet
|
thomaskelder
|
new
|
03/25/09
|
|
#868
|
Gene not found after setting xref info
|
minor
|
Wikipathways applet
|
thomaskelder
|
new
|
03/26/09
|
|
#870
|
Reverting and Authorship
|
minor
|
WikiPathways website
|
thomaskelder
|
assigned
|
03/27/09
|
|
#913
|
Auto-save happens right after manual save
|
minor
|
Wikipathways applet
|
thomaskelder
|
new
|
05/22/09
|
|
#937
|
Basic visualization is 'lost' while working
|
minor
|
Pathvisio
|
martijn
|
new
|
06/20/09
|
|
#942
|
PubChem SID vs CID
|
minor
|
GeneDatabases
|
martijn
|
new
|
07/06/09
|
|
#962
|
Apache error log: type missmatched
|
minor
|
WikiPathways website
|
thomaskelder
|
new
|
08/02/09
|
|
#969
|
Reduce memory usage of Pathway::getAllPathways
|
minor
|
WikiPathways website
|
AlexanderPico
|
new
|
08/07/09
|
|
#971
|
Problems with Inferator
|
minor
|
uncategorized
|
KristinaHanspers
|
new
|
08/08/09
|
|
#974
|
Deleted pathways still show up in most edited list
|
minor
|
WikiPathways website
|
AlexanderPico
|
new
|
08/13/09
|
|
#984
|
DataNode values to the right of genes are truncated
|
minor
|
Pathvisio
|
martijn
|
new
|
08/28/09
|
|
#988
|
Cancel button in DataNode search doesn't work + closing the window causes issues with browser
|
minor
|
Wikipathways applet
|
thomaskelder
|
new
|
09/04/09
|
|
#995
|
Pathway download should go via webstart
|
minor
|
Pathvisio
|
martijn
|
new
|
09/21/09
|
|
#999
|
Problems with "break complex" feature in applet
|
minor
|
Wikipathways applet
|
thomaskelder
|
new
|
09/28/09
|
|
#1000
|
Nesting complexes doesn't work
|
minor
|
Wikipathways applet
|
thomaskelder
|
new
|
09/28/09
|
|
#1004
|
Set gene database -> previous not closed
|
minor
|
uncategorized
|
martijn
|
new
|
10/05/09
|
|
#1005
|
Displaying "Text label" (visualization options) creates overlapping labels on nodes
|
minor
|
Pathvisio
|
martijn
|
reopened
|
10/07/09
|
|
#1010
|
revert description contains html code instead of link
|
minor
|
WikiPathways website
|
AlexanderPico
|
new
|
10/12/09
|
|
#1023
|
Curation tag bots adds "unconnected" tag to pathways where the only unconnected lines are graphics
|
minor
|
uncategorized
|
martijn
|
reopened
|
10/27/09
|
|
#1024
|
BiopaxRef as attribute or as element
|
minor
|
Pathvisio
|
martijn
|
new
|
10/27/09
|
|
#1027
|
Pasting objects with literature refs
|
minor
|
Pathvisio
|
martijn
|
new
|
10/28/09
|
|
#1038
|
Segment handles drag behind
|
minor
|
Wikipathways applet
|
thomaskelder
|
new
|
11/17/09
|
|
#1040
|
Bug: ouroboros pathway leads to infinite recursion
|
minor
|
Pathvisio
|
martijn
|
new
|
11/17/09
|
|
#1047
|
Visualization Options: Scrolling causes parameters in "Select samples" in table to disappear
|
minor
|
Pathvisio
|
martijn
|
new
|
11/19/09
|
|
#1059
|
Issues with labels: Selection and borders
|
minor
|
Wikipathways applet
|
thomaskelder
|
new
|
12/04/09
|
|
#1064
|
Comments on Legend Feature
|
minor
|
Pathvisio
|
martijn
|
new
|
12/30/09
|
|
#1065
|
BioPAXPlugin: better error on importing reactome / huge files
|
minor
|
Pathvisio
|
martijn
|
new
|
12/31/09
|
|
#1077
|
Keyboard shortcut Ctrl+L doesn't work on Mac
|
minor
|
Wikipathways applet
|
thomaskelder
|
new
|
01/13/10
|
|
#1081
|
Cleanup LineType
|
minor
|
Pathvisio
|
AlexanderPico
|
assigned
|
01/14/10
|
|
#1083
|
Valid database IDs not found through Search in applet
|
minor
|
GeneDatabases
|
AlexanderPico
|
new
|
01/14/10
|
|
#1095
|
"Show Advanced Properties" preference should take effect immediately
|
minor
|
Pathvisio
|
AlexanderPico
|
assigned
|
01/26/10
|
|
#1100
|
pathway viewer: gpml with wrong encoding fails to parse in Chrome
|
minor
|
WikiPathways website
|
thomaskelder
|
new
|
01/28/10
|
|
#1101
|
test pathway viewer on Windows Vista / 7 (+FF and IE)
|
minor
|
WikiPathways website
|
thomaskelder
|
new
|
01/28/10
|
|
#1103
|
pathway viewer & IE 6/7: IE 6/7: linkouts in xref info panel don't scroll correctly
|
minor
|
WikiPathways website
|
thomaskelder
|
new
|
01/28/10
|
|
#1104
|
PathVisio: TIFF export does not work (exact same error as ticket 983)
|
minor
|
Pathvisio
|
martijn
|
new
|
01/28/10
|
|
#1106
|
Curation tag edit/delete buttons are not visible in IE6
|
minor
|
WikiPathways website
|
AlexanderPico
|
new
|
02/01/10
|
|
#1112
|
Error when reverting to deleted revision
|
minor
|
WikiPathways website
|
thomaskelder
|
assigned
|
02/04/10
|
|
#1114
|
Pathway Viewer: Right-click temporarily blanks the viewer window
|
minor
|
WikiPathways website
|
thomaskelder
|
assigned
|
02/04/10
|
|
#1119
|
Batch download: A.gambiae listed under Featured and Analysis downloads, even though no pathways are tagged
|
minor
|
WikiPathways website
|
AlexanderPico
|
new
|
02/08/10
|
|
#1120
|
Problems with the Arabidopsis db
|
minor
|
GeneDatabases
|
AlexanderPico
|
new
|
02/09/10
|
|
#1121
|
GPML.xsd does not define a default line thickness
|
minor
|
Pathvisio
|
martijn
|
new
|
02/09/10
|
|
#1132
|
Moving expression set position causes loss of connection to advanced color set
|
minor
|
Pathvisio
|
martijn
|
new
|
03/02/10
|
|
#1133
|
Saving fails after automatic logout in WikiPathways
|
minor
|
Wikipathways applet
|
AlexanderPico
|
new
|
03/03/10
|