All Classes

AboutDlg AbstractCompleterFilter AbstractConnector Actions Actions.ExitAction Actions.FullScreenAction Actions.ImportAction Actions.SaveToServerAction Actions.WikiAction Adjustable AlignType AnchorShape AnchorType AngleHandler AppletMain AppletMain ApplicationEvent ArrowShape ArrowShape.FillType BackpageExpression BackpagePane BackpageTextProvider BackpageTextProvider.BackpageAttributes BackpageTextProvider.BackpageHook BackpageTextProvider.BackpageXrefs BatikImageExporter BatikImageWithDataExporter BibliographyApplet BiopaxElement BiopaxElementManager BiopaxEvent BiopaxListener BiopaxProperty BiopaxReferenceManager BooleanHandler Bot Bot.BotException BotReport BrowseButtonActionListener CachedData CachedData.Callback CategoryApplet Citation ColorConverter ColorExporter ColorGradient ColorHandler ColorRule ColorSet ColorSetEvent ColorSetManager ColorSetManager.ColorSetListener ColorSetObject ComboHandler CommentPanel CommentsHandler CommonActions CommonActions.AboutAction CommonActions.AddLiteratureAction CommonActions.EditLiteratureAction CommonActions.ExitAction CommonActions.ExportAction CommonActions.ImportAction CommonActions.LayoutAction CommonActions.NewElementAction CommonActions.PropertiesAction CommonActions.SaveAction CommonActions.ZoomAction CommonActions.ZoomToFitAction Compat CompleterFilter CompleterFilterWithWindow CompleterQueryFilter CompleterQueryTextField CompleterTextField ConnectorBot ConnectorRestrictions ConnectorShape ConnectorShape.Segment ConnectorShape.WayPoint ConnectorShapeFactory ConnectorType ContextSensitiveEditor Converter ConverterException Criterion Criterion.CriterionException CurvedConnectorShape DatabaseSearchDialog DataNodeDialog DataNodeListExporter DataNodeType DataSourceHandler DataSourceModel DBConnDerby DBConnectorSwing DebugList DebugList.DebugIterator DefaultTemplates DefaultTemplates.DataNodeTemplate DefaultTemplates.InteractionTemplate DefaultTemplates.LabelTemplate DefaultTemplates.LineTemplate DefaultTemplates.ReactionTemplate DefaultTemplates.ShapeTemplate DescriptionApplet DescriptionBot DropDownButton ElbowConnectorShape Engine Engine.ApplicationEventListener EUGeneExporter EventDispatchThreadOnly FileUtils FilterListModel FontChooser FontHandler FontNameRenderer FreeConnectorShape GdbEvent GdbEvent.Type GdbManager GdbManager.GdbEventListener GeneProduct GenMappExporter GexManager GexManager.GexManagerEvent GexManager.GexManagerListener GlobalPreference Globals GpmlDiff GpmlFormat GpmlFormatAbstract GpmlFormatAbstract.AttributeInfo GpmlFormatAbstract.ByElementName GpmlFormatReader GpmlFormatVersion GpmlFormatWriter Graphics GraphicsShape GraphLink GraphLink.GraphIdContainer GraphLink.GraphRefContainer Group GroupPainter GroupPainterRegistry GroupStyle GuiMain Handle ImageButton ImageExporter ImporterExporterFileFilter InfoBox InputEvent JarUtils JScrollPaneAdjuster JTableRowHeaderResizer KeyEvent Label LabelDialog LayoutType Legend LinAlg LinAlg.Point Line LineStyle LineType LinkAnchor LinkProvider ListWithPropertiesTableModel LiteratureBot LitReferencePanel Logger Main MainPanel MainPanelStandalone Map2D MappFormat MatchResult MGroup MIMShapes MLine MouseEvent MState Namespaces NumberHandler ObjectsPane ObjectType OkCancelDialog OptionProvider OrientationType Parameter PatchMain Pathway Pathway.StatusFlagEvent Pathway.StatusFlagListener PathwayElement PathwayElementDialog PathwayElementEvent PathwayElementListener PathwayElementMenuListener PathwayElementMenuListener.PathwayElementMenuHook PathwayElementPanel PathwayEvent PathwayExporter PathwayImporter PathwayImportHandler PathwayListener PathwayPageApplet PathwayParser PathwayParser.ParseException PathwayTableModel PathwayTransferable PermissiveComboBox Plugin PluginClassLoader PluginManager PluginManager.PluginInfo PluginManagerDlg Preference PreferenceEvent PreferenceListener PreferenceManager PreferencePanel PreferencesDlg PreferencesDlg.DefaultPreferencePanel PreferencesDlg.DefaultPreferencePanel.Builder Preloader ProgressDialog ProgressKeeper ProgressKeeper.ProgressListener Property PropertyColumn PropertyDisplayManager PropertyDisplayManager.PropPreference PropertyLabelRenderer PropertyManager PropertyType PropertyType PropertyView PublicationXref PublicationXRefDialog PubMedQuery PubMedResult PvDesktop RasterImageExporter RasterImageWithDataExporter Relation ReporterData Resources Revision RolloverButton RowHeaderRenderer RowHeaderResizer RowNumberHeader RowWithProperties RunnableWithProgress Sample SaveReminder SearchMethods SearchMethods.ByPatternMatcher SearchMethods.ByXrefMatcher SearchMethods.SearchException SearchPane SearchTableModel SearchTableModel.Column SegmentedConnector SelectionBox SelectionBox.SelectionEvent SelectionBox.SelectionListener Shape ShapeRegistry ShapeType SimpleFileFilter SimpleGex StandaloneActions StandaloneActions.HelpAction StandaloneActions.NewAction StandaloneActions.OpenAction StandaloneActions.PluginManagerAction StandaloneActions.PreferencesAction StandaloneActions.SearchAction StandaloneActions.SelectGeneDbAction StandaloneCompat State StaticProperty StaticPropertyType Stats StopWatch StraightConnectorShape SwingEngine SwingEngine.Browser SwingKeyEvent SwingMouseEvent Template TestPanel1 TestPanel1Descriptor TestPanel2 TestPanel2Descriptor TestPanel3 TestPanel3Descriptor TextFieldUtils ThreadSafe ToolTipProvider TypeHandler UndoAction UndoManager UndoManagerEvent UndoManagerListener UserInterfaceHandler Utils ValignType VAnchor VElementMouseEvent VElementMouseListener ViewActions ViewActions.CopyAction ViewActions.KeyMoveAction ViewActions.OrderBottomAction ViewActions.OrderDownAction ViewActions.OrderTopAction ViewActions.OrderUpAction ViewActions.PasteAction ViewActions.UndoAction ViewerApplet Visualization VisualizationEvent VisualizationManager VisualizationManager.VisualizationException VisualizationManager.VisualizationListener VisualizationMethod VisualizationMethodProvider VisualizationMethodRegistry VPathway VPathway.XComparator VPathway.YComparator VPathway.ZComparator VPathwayElement VPathwayEvent VPathwayListener VPathwaySwing VPathwayWrapper VPathwayWrapperBase VPoint WikiPathways WikiPathways.XmlRpcCookieHttpTransport WikiPathwaysCache WikiPathwaysClient WikiPathwaysExporter WikiPathwaysInit Wizard WizardController WizardModel WizardPanelDescriptor WizardPanelNotFoundException WorkerThreadOnly WrapLayout XRefBot XrefWithSymbol